Package: jstable 1.3.7

jstable: Create Tables from Different Types of Regression

Create regression tables from generalized linear model(GLM), generalized estimating equation(GEE), generalized linear mixed-effects model(GLMM), Cox proportional hazards model, survey-weighted generalized linear model(svyglm) and survey-weighted Cox model results for publication.

Authors:Jinseob Kim [aut, cre], Zarathu [cph, fnd], Yoonkyoung Jeon [aut], Jaehun Shon [aut], Hyojong Myung [aut], Hyungwoo Jo [aut]

jstable_1.3.7.tar.gz
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jstable.pdf |jstable.html✨
jstable/json (API)
NEWS

# Install 'jstable' in R:
install.packages('jstable', repos = c('https://jinseob2kim.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/jinseob2kim/jstable/issues

Datasets:
  • mort - DATASET_TITLE

On CRAN:

labelregressiontable

9.41 score 23 stars 1 packages 194 scripts 2.1k downloads 33 exports 64 dependencies

Last updated 3 days agofrom:c4ddf77224. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 19 2024
R-4.5-winOKNov 19 2024
R-4.5-linuxOKNov 19 2024
R-4.4-winOKNov 19 2024
R-4.4-macOKNov 19 2024
R-4.3-winOKNov 19 2024
R-4.3-macOKNov 19 2024

Exports:coefNAcount_event_bycox2.displaycoxme.displayCreateTableOne2CreateTableOneJSgeeExpgeeglm.displaygeeUniglmshow.displayLabelepiDisplayLabeljsCoxLabeljsGeeglmLabeljsMetricLabeljsMixedLabeljsRanefLabeljsTablelmer.displaymk.levmk.lev.varopt.dataopt.rocopt.simpledownopt.tb1opt.tbregsvycox.displaysvyCreateTableOne2svyCreateTableOneJSsvyregress.displayTableSubgroupCoxTableSubgroupGLMTableSubgroupMultiCoxTableSubgroupMultiGLM

Dependencies:backportsbdsmatrixbitbit64bootbroomclassclicliprcoxmecpp11crayondata.tableDBIdplyre1071fansiforcatsgdatageepackgenericsgluegmodelsgtoolshavenhmslabelledlatticelifecyclelme4magrittrMASSMatrixminqamitoolsnlmenloptrnumDerivpillarpkgconfigprettyunitsprogressproxypurrrR6RcppRcppArmadilloRcppEigenreadrrlangstringistringrsurveysurvivaltableonetibbletidyrtidyselecttzdbutf8vctrsvroomwithrzoo

Introduce jstable

Jinseob Kim

Rendered fromjstable.Rmdusingknitr::rmarkdownon Nov 19 2024.

Last update: 2023-10-18
Started: 2019-01-17

Readme and manuals

Help Manual

Help pageTopics
coefNA: make coefficient table with NAcoefNA
count_event_by: funciton to count event, subgroup number inside TableSubgroupCox, TableSubgroupMultiCoxcount_event_by
cox2.display: table for coxph.object with model option: TRUE - allow "frailty" or "cluster" modelcox2.display
coxExp: transform the unit of coefficients in cox model(internal function)coxExp
coxme.display: table for coxme.object (coxme package)coxme.display
coxmeTable: Summary table of coxme.object(internal function)coxmeTable
CreateTableOne2: Modified CreateTableOne function in tableone packageCreateTableOne2
CreateTableOneJS: Modified CreateTableOne function in tableone packageCreateTableOneJS
extractAIC.coxme: Extract AIC from coxme.objectextractAIC.coxme
geeExp: transform the unit of coefficients (internal function)geeExp
geeglm.displaygeeglm.display
geeUni: The coefficient of univariate gee (internal function)geeUni
glmshow.display: Show summary table of glm object.glmshow.display
LabelepiDisplay: Apply label information to epiDisplay object using label dataLabelepiDisplay
LabeljsCox: Apply label information to cox2.display object using label dataLabeljsCox
LabeljsGeeglm: Apply label information to geeglm.display object using label dataLabeljsGeeglm
LabeljsMetric: Apply label information to jstable metric object using label dataLabeljsMetric
LabeljsMixed: Apply label information to jstable object using label dataLabeljsMixed
LabeljsRanef: Apply label information to jstable random effect object using label dataLabeljsRanef
LabeljsTable: Apply label information to jstable object using label dataLabeljsTable
lmer.display: table for "lmerMod" or "glmerMod" object (lme4 package)lmer.display
lmerExp: transform the unit of coefficients (internal function)lmerExp
Export label and level: multiple variablemk.lev
Export label and level: one variablemk.lev.var
DATASET_TITLEmort
datable option for data(DT package)opt.data
datable option for ROC result(DT package)opt.roc
datable option for simple download(DT package)opt.simpledown
datable option for table 1(DT package)opt.tb1
datable option for regression table(DT package)opt.tbreg
svycoxph.display: table for svycoxph.object in survey package.svycox.display
svyCreateTableOne2: Modified svyCreateTableOne function in tableone packagesvyCreateTableOne2
svyCreateTableOneJS: Modified CreateTableOne function in tableone packagesvyCreateTableOneJS
svyregress.display: table for svyglm.objectsvyregress.display
TableSubgroupCox: Sub-group analysis table for Cox/svycox model.TableSubgroupCox
TableSubgroupGLM: Sub-group analysis table for GLM.TableSubgroupGLM
TableSubgroupMultiCox: Multiple sub-group analysis table for Cox/svycox model.TableSubgroupMultiCox
TableSubgroupMultiGLM: Multiple sub-group analysis table for GLM.TableSubgroupMultiGLM